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1

Contagion! The BBC Four Pandemic – The model behind the documentary

Klepac, Petra, Kissler, Stephen, Gog, Julia

Journal:

Year:

2018

Language:

english

File:

PDF, 1.07 MB

english, 2018

2

Spatial Transmission of 2009 Pandemic Influenza in the US

Gog, Julia R., Ballesteros, Sébastien, Viboud, Cécile, Simonsen, Lone, Bjornstad, Ottar N., Shaman, Jeffrey, Chao, Dennis L., Khan, Farid, Grenfell, Bryan T., Ferguson, Neil M.

Journal:

PLoS Computational Biology

Year:

2014

Language:

english

File:

PDF, 1.12 MB

english, 2014

3

Infectious Disease Surveillance in the Big Data Era: Towards Faster and Locally Relevant Systems

Simonsen, Lone, Gog, Julia R., Olson, Don, Viboud, Cécile

Journal:

The Journal of Infectious Diseases

Year:

2016

Language:

english

File:

PDF, 255 KB

english, 2016

4

Influenza drift and epidemic size: the race between generating and escaping immunity

Maciej F. Boni, Julia R. Gog, Viggo Andreasen, Freddy B. Christiansen

Journal:

Theoretical Population Biology

Year:

2004

Language:

english

File:

PDF, 401 KB

english, 2004

5

Epidemic Dynamics and Antigenic Evolution in a Single Season of Influenza A

Maciej F. Boni, Julia R. Gog, Viggo Andreasen and Marcus W. Feldman

Journal:

Proceedings Biological Sciences

Year:

2006

Language:

english

File:

PDF, 1.73 MB

english, 2006

6

The Role of Social Contacts and Original Antigenic Sin in Shaping the Age Pattern of Immunity to Seasonal Influenza

Kucharski, Adam J., Gog, Julia R., Antia, Rustom

Journal:

PLoS Computational Biology

Year:

2012

Language:

english

File:

PDF, 360 KB

english, 2012

7

Five challenges in modelling interacting strain dynamics

Wikramaratna, Paul S., Kucharski, Adam, Gupta, Sunetra, Andreasen, Viggo, McLean, Angela R., Gog, Julia R.

Journal:

Year:

2015

Language:

english

File:

PDF, 399 KB

english, 2015

8

A new method for detecting signal regions in ordered sequences of real numbers, and application to viral genomic data

Gog, Julia R., Lever, Andrew M. L., Skittrall, Jordan P., Forrester, Naomi

Journal:

Year:

2018

Language:

english

File:

PDF, 5.98 MB

english, 2018

9

Effectiveness of isolation, testing, contact tracing, and physical distancing on reducing transmission of SARS-CoV-2 in different settings: a mathematical modelling study

Kucharski, Adam J, Klepac, Petra, Conlan, Andrew J K, Kissler, Stephen M, Tang, Maria L, Fry, Hannah, Gog, Julia R, Edmunds, W John, Emery, Jon C, Medley, Graham, Munday, James D, Russell, Timothy W,

Journal:

The Lancet Infectious Diseases

Year:

2020

File:

PDF, 697 KB

2020

10

Semiparametric estimation of the duration of immunity from infectious disease time series: influenza as a case-study

Yingcun Xia, Julia R. Gog, Bryan T. Grenfell

Journal:

Journal of the Royal Statistical Society: Series C (Applied Statistics)

Year:

2005

Language:

english

File:

PDF, 510 KB

english, 2005

11

Age profile of immunity to influenza: Effect of original antigenic sin

Adam J. Kucharski, Julia R. Gog

Journal:

Theoretical Population Biology

Year:

2012

Language:

english

File:

PDF, 614 KB

english, 2012

12

The impact of evolutionary constraints on influenza dynamics

Journal:

Year:

2008

Language:

english

File:

PDF, 572 KB

english, 2008

13

Pathogen strains: no joke

Bryan Grenfell, Julia Gog

Journal:

Trends in Ecology & Evolution

Year:

2001

Language:

english

File:

PDF, 16 KB

english, 2001

14

Modelling dynamics of the type I interferon response to in vitro viral infection

Howat, Tom J., Barreca, Cristina, O'Hare, Peter, Gog, Julia R., Grenfell, Bryan T.

Journal:

Journal of The Royal Society Interface

Year:

2006

Language:

english

File:

PDF, 451 KB

english, 2006

15

Semiparametric Estimation of the Duration of Immunity from Infectious Disease Time Series: Influenza as a Case-Study

Yingcun Xia, Julia R. Gog and Bryan T. Grenfell

Journal:

Journal of the Royal Statistical Society: Series C (Applied Statistics)

Year:

2005

Language:

english

File:

PDF, 1.54 MB

english, 2005

16

Capturing the dynamics of pathogens with many strains

Kucharski, Adam J., Andreasen, Viggo, Gog, Julia R.

Journal:

Journal of Mathematical Biology

Year:

2016

Language:

english

File:

PDF, 671 KB

english, 2016

17

Endoluminal Gingival Fibroblast Transfer Reduces the Size of Rabbit Carotid Aneurisms via Elastin Repair

Durand, E., Fournier, B., Couty, L., Lemitre, M., Achouh, P., Julia, P., Trinquart, L., Fabiani, J. N., Seguier, S., Gogly, B., Coulomb, B., Lafont, A.

Journal:

Arteriosclerosis Thrombosis and Vascular Biology

Year:

2012

Language:

english

File:

PDF, 4.95 MB

english, 2012

18

Seven challenges in modeling pathogen dynamics within-host and across scales

Gog, Julia R., Pellis, Lorenzo, Wood, James L.N., McLean, Angela R., Arinaminpathy, Nimalan, Lloyd-Smith, James O.

Journal:

Year:

2015

File:

PDF, 721 KB

2015

19

A Bayesian Approach to Analyse Genetic Variation within RNA Viral Populations

McKinley, Trevelyan J., Murcia, Pablo R., Gog, Julia R., Varela, Mariana, Wood, James L. N., Kosakovsky Pond, Sergei L.

Journal:

PLoS Computational Biology

Year:

2011

Language:

english

File:

PDF, 495 KB

english, 2011

20

Identification of a Novel Splice Variant Form of the Influenza A Virus M2 Ion Channel with an Antigenically Distinct Ectodomain

Wise, Helen M., Hutchinson, Edward C., Jagger, Brett W., Stuart, Amanda D., Kang, Zi H., Robb, Nicole, Schwartzman, Louis M., Kash, John C., Fodor, Ervin, Firth, Andrew E., Gog, Julia R., Taubenberger

Journal:

Year:

2012

Language:

english

File:

PDF, 2.40 MB

english, 2012

21

Eight challenges in phylodynamic inference

Frost, Simon D.W., Pybus, Oliver G., Gog, Julia R., Viboud, Cecile, Bonhoeffer, Sebastian, Bedford, Trevor

Journal:

Year:

2015

Language:

english

File:

PDF, 456 KB

english, 2015

22

Disease in Endangered Metapopulations: The Importance of Alternative Hosts

Julia Gog, Rosie Woodroffe and Jonathan Swinton

Journal:

Proceedings Biological Sciences

Year:

2002

Language:

english

File:

PDF, 942 KB

english, 2002

23

Human mobility and the spatial transmission of influenza in the United States

Charu, Vivek, Zeger, Scott, Gog, Julia, Bjørnstad, Ottar N., Kissler, Stephen, Simonsen, Lone, Grenfell, Bryan T., Viboud, Cécile, Salathé, Marcel

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 2.68 MB

english, 2017

24

Quantifying Transmission of Highly Pathogenic and Low Pathogenicity H7N1 Avian Influenza in Turkeys

Saenz, Roberto A., Essen, Steve C., Brookes, Sharon M., Iqbal, Munir, Wood, James L. N., Grenfell, Bryan T., McCauley, John W., Brown, Ian H., Gog, Julia R., Boni, Maciej F.

Journal:

Year:

2012

Language:

english

File:

PDF, 367 KB

english, 2012

25

Demonstrating the Use of High-Volume Electronic Medical Claims Data to Monitor Local and Regional Influenza Activity in the US

Viboud, Cécile, Charu, Vivek, Olson, Donald, Ballesteros, Sébastien, Gog, Julia, Khan, Farid, Grenfell, Bryan, Simonsen, Lone, Goldstein, Edward

Journal:

Year:

2014

Language:

english

File:

PDF, 1.54 MB

english, 2014

26

Urbanization and humidity shape the intensity of influenza epidemics in U.S. cities

Dalziel, Benjamin D., Kissler, Stephen, Gog, Julia R., Viboud, Cecile, Bjørnstad, Ottar N., Metcalf, C. Jessica E., Grenfell, Bryan T.

Journal:

Year:

2018

Language:

english

File:

PDF, 711 KB

english, 2018

27

Geographic transmission hubs of the 2009 influenza pandemic in the United States

Kissler, Stephen M., Gog, Julia R., Viboud, Cécile, Charu, Vivek, Bjørnstad, Ottar N., Simonsen, Lone, Grenfell, Bryan T.

Journal:

Year:

2018

Language:

english

File:

PDF, 992 KB

english, 2018

28

A scale-free analysis of the HIV-1 genome demonstrates multiple conserved regions of structural and functional importance

Skittrall, Jordan P., Ingemarsdotter, Carin K., Gog, Julia R., Lever, Andrew M. L., Weinberger, Leor

Journal:

PLoS Computational Biology

Year:

2019

Language:

english

File:

PDF, 6.33 MB

english, 2019

29

Pease (1987): The evolutionary epidemiology of influenza A

Andreasen, Viggo, Gog, Julia R.

Journal:

Theoretical Population Biology

Year:

2020

File:

PDF, 470 KB

2020

30

How you can help with COVID-19 modelling

Journal:

Nature Reviews Physics

Year:

2020

File:

PDF, 682 KB

2020

31

Symbolic transfer entropy reveals the age structure of pandemic influenza transmission from high-volume influenza-like illness data

Kissler, Stephen M., Viboud, CÃ©cile, Grenfell, Bryan T., Gog, Julia R.

Journal:

Journal of The Royal Society Interface

Year:

2020

File:

PDF, 630 KB

2020

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